Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.89■□□□□ 0.13
Col3a1P08121 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.89■□□□□ 0.13
Col3a1P08121 Mir3547-201ENSMUST00000175461 88 ntBASIC15.89■□□□□ 0.13
Col3a1P08121 Gm18056-201ENSMUST00000207670 568 ntBASIC15.89■□□□□ 0.13
Col3a1P08121 Gm18061-201ENSMUST00000208350 562 ntBASIC15.89■□□□□ 0.13
Col3a1P08121 Gm18063-201ENSMUST00000208529 568 ntBASIC15.89■□□□□ 0.13
Col3a1P08121 Gm18052-201ENSMUST00000208750 559 ntBASIC15.89■□□□□ 0.13
Col3a1P08121 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.89■□□□□ 0.13
Col3a1P08121 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Col3a1P08121 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.89■□□□□ 0.13
Col3a1P08121 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.88■□□□□ 0.13
Col3a1P08121 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.88■□□□□ 0.13
Col3a1P08121 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
Col3a1P08121 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col3a1P08121 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.88■□□□□ 0.13
Col3a1P08121 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.88■□□□□ 0.13
Col3a1P08121 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col3a1P08121 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Col3a1P08121 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Gm24526-201ENSMUST00000082921 158 ntBASIC15.88■□□□□ 0.13
Col3a1P08121 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.88■□□□□ 0.13
Col3a1P08121 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col3a1P08121 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col3a1P08121 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col3a1P08121 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col3a1P08121 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.87■□□□□ 0.13
Col3a1P08121 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Gm4986-201ENSMUST00000119731 549 ntBASIC15.87■□□□□ 0.13
Col3a1P08121 Gm14704-201ENSMUST00000120300 874 ntBASIC15.87■□□□□ 0.13
Col3a1P08121 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col3a1P08121 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Col3a1P08121 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.87■□□□□ 0.13
Col3a1P08121 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.87■□□□□ 0.13
Col3a1P08121 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col3a1P08121 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col3a1P08121 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Col3a1P08121 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col3a1P08121 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col3a1P08121 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Col3a1P08121 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col3a1P08121 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col3a1P08121 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col3a1P08121 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col3a1P08121 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col3a1P08121 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col3a1P08121 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.86■□□□□ 0.13
Col3a1P08121 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col3a1P08121 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.86■□□□□ 0.13
Col3a1P08121 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.86■□□□□ 0.13
Col3a1P08121 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col3a1P08121 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms