Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P04224 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
P04224 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
P04224 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.83□□□□□ -0.52
P04224 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P04224 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.83□□□□□ -0.52
P04224 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
P04224 Gm14140-201ENSMUST00000119999 995 ntBASIC11.83□□□□□ -0.52
P04224 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P04224 Gm27920-201ENSMUST00000183953 96 ntBASIC11.83□□□□□ -0.52
P04224 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.83□□□□□ -0.52
P04224 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.83□□□□□ -0.52
P04224 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.83□□□□□ -0.52
P04224 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
P04224 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P04224 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P04224 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.83□□□□□ -0.52
P04224 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.83□□□□□ -0.52
P04224 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
P04224 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.83□□□□□ -0.52
P04224 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.83□□□□□ -0.52
P04224 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P04224 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P04224 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04224 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
P04224 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.82□□□□□ -0.52
P04224 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P04224 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.82□□□□□ -0.52
P04224 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.82□□□□□ -0.52
P04224 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.82□□□□□ -0.52
P04224 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.82□□□□□ -0.52
P04224 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
P04224 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.82□□□□□ -0.52
P04224 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.82□□□□□ -0.52
P04224 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.82□□□□□ -0.52
P04224 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.82□□□□□ -0.52
P04224 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P04224 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P04224 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.81□□□□□ -0.52
P04224 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P04224 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P04224 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P04224 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.81□□□□□ -0.52
P04224 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.81□□□□□ -0.52
P04224 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P04224 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.81□□□□□ -0.52
P04224 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P04224 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.81□□□□□ -0.52
P04224 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.81□□□□□ -0.52
P04224 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.81□□□□□ -0.52
P04224 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P04224 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P04224 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
P04224 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms