Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC9.84□□□□□ -0.83
TcraP01849 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
TcraP01849 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.84□□□□□ -0.83
TcraP01849 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
TcraP01849 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 AC116503.1-201ENSMUST00000215445 2192 ntBASIC9.84□□□□□ -0.83
TcraP01849 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.84□□□□□ -0.83
TcraP01849 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
TcraP01849 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.84□□□□□ -0.83
TcraP01849 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC9.84□□□□□ -0.83
TcraP01849 Gm27300-201ENSMUST00000184085 97 ntBASIC9.84□□□□□ -0.83
TcraP01849 Gm27335-201ENSMUST00000184758 97 ntBASIC9.84□□□□□ -0.83
TcraP01849 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 AC084391.1-201ENSMUST00000200651 141 ntBASIC9.84□□□□□ -0.83
TcraP01849 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
TcraP01849 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
TcraP01849 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
TcraP01849 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Pck2-205ENSMUST00000226352 2784 ntBASIC9.84□□□□□ -0.83
TcraP01849 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.84□□□□□ -0.83
TcraP01849 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TcraP01849 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
TcraP01849 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Gm12350-201ENSMUST00000121208 462 ntBASIC9.83□□□□□ -0.84
TcraP01849 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC9.83□□□□□ -0.84
TcraP01849 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC9.83□□□□□ -0.84
TcraP01849 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Gm45747-201ENSMUST00000212203 999 ntBASIC9.83□□□□□ -0.84
TcraP01849 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC9.83□□□□□ -0.84
TcraP01849 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC9.83□□□□□ -0.84
TcraP01849 Gm10154-201ENSMUST00000084445 354 ntBASIC9.83□□□□□ -0.84
TcraP01849 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
TcraP01849 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.83□□□□□ -0.84
TcraP01849 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TcraP01849 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms