Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.88□□□□□ -0.35
Vti1bO88384 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.88□□□□□ -0.35
Vti1bO88384 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.88□□□□□ -0.35
Vti1bO88384 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Vti1bO88384 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.88□□□□□ -0.35
Vti1bO88384 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.88□□□□□ -0.35
Vti1bO88384 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.88□□□□□ -0.35
Vti1bO88384 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.88□□□□□ -0.35
Vti1bO88384 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.88□□□□□ -0.35
Vti1bO88384 Gm44344-201ENSMUST00000200287 129 ntBASIC12.88□□□□□ -0.35
Vti1bO88384 Gm6916-202ENSMUST00000205523 195 ntBASIC12.88□□□□□ -0.35
Vti1bO88384 Gm46209-201ENSMUST00000217912 553 ntBASIC12.88□□□□□ -0.35
Vti1bO88384 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.88□□□□□ -0.35
Vti1bO88384 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.88□□□□□ -0.35
Vti1bO88384 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.88□□□□□ -0.35
Vti1bO88384 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.88□□□□□ -0.35
Vti1bO88384 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vti1bO88384 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vti1bO88384 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vti1bO88384 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.87□□□□□ -0.35
Vti1bO88384 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vti1bO88384 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vti1bO88384 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vti1bO88384 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.87□□□□□ -0.35
Vti1bO88384 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.87□□□□□ -0.35
Vti1bO88384 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Vti1bO88384 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vti1bO88384 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vti1bO88384 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.87□□□□□ -0.35
Vti1bO88384 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vti1bO88384 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.87□□□□□ -0.35
Vti1bO88384 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1bO88384 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vti1bO88384 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Vti1bO88384 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.86□□□□□ -0.35
Vti1bO88384 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Vti1bO88384 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vti1bO88384 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Vti1bO88384 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.86□□□□□ -0.35
Vti1bO88384 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Gm27306-201ENSMUST00000183970 107 ntBASIC12.86□□□□□ -0.35
Vti1bO88384 Gm27321-201ENSMUST00000185021 205 ntBASIC12.86□□□□□ -0.35
Vti1bO88384 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.86□□□□□ -0.35
Vti1bO88384 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms