Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.62□□□□□ -0.71
Pde6dO55057 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.62□□□□□ -0.71
Pde6dO55057 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Pde6dO55057 Gm6550-201ENSMUST00000187574 993 ntBASIC10.62□□□□□ -0.71
Pde6dO55057 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.62□□□□□ -0.71
Pde6dO55057 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.62□□□□□ -0.71
Pde6dO55057 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.62□□□□□ -0.71
Pde6dO55057 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pde6dO55057 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.62□□□□□ -0.71
Pde6dO55057 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pde6dO55057 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.61□□□□□ -0.71
Pde6dO55057 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Pde6dO55057 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.61□□□□□ -0.71
Pde6dO55057 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pde6dO55057 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Gm16198-201ENSMUST00000118766 670 ntBASIC10.61□□□□□ -0.71
Pde6dO55057 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.61□□□□□ -0.71
Pde6dO55057 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Gm7230-201ENSMUST00000173026 815 ntBASIC10.61□□□□□ -0.71
Pde6dO55057 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.61□□□□□ -0.71
Pde6dO55057 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.61□□□□□ -0.71
Pde6dO55057 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pde6dO55057 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pde6dO55057 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pde6dO55057 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.6□□□□□ -0.71
Pde6dO55057 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.6□□□□□ -0.71
Pde6dO55057 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.6□□□□□ -0.71
Pde6dO55057 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.6□□□□□ -0.71
Pde6dO55057 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Pde6dO55057 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pde6dO55057 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 199.4 ms