Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Stx1aO35526 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.15■□□□□ 0.02
Stx1aO35526 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Stx1aO35526 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Stx1aO35526 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Mir874-201ENSMUST00000104769 76 ntBASIC15.15■□□□□ 0.02
Stx1aO35526 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.15■□□□□ 0.02
Stx1aO35526 Gm15770-201ENSMUST00000117498 584 ntBASIC15.15■□□□□ 0.02
Stx1aO35526 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.15■□□□□ 0.02
Stx1aO35526 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.15■□□□□ 0.02
Stx1aO35526 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Stx1aO35526 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.15■□□□□ 0.02
Stx1aO35526 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.15■□□□□ 0.02
Stx1aO35526 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Stx1aO35526 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Stx1aO35526 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stx1aO35526 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Stx1aO35526 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Stx1aO35526 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Gm22065-201ENSMUST00000103753 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm22066-201ENSMUST00000103761 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm24932-201ENSMUST00000103763 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm24115-201ENSMUST00000103799 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm22190-201ENSMUST00000103827 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm22191-201ENSMUST00000103831 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm24721-201ENSMUST00000103849 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm28018-201ENSMUST00000103869 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm26399-201ENSMUST00000103937 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Mir1897-201ENSMUST00000122581 272 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.14■□□□□ 0.01
Stx1aO35526 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
Stx1aO35526 Gm25349-201ENSMUST00000177728 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm23616-201ENSMUST00000177797 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm25871-201ENSMUST00000177816 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm24752-201ENSMUST00000178240 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm24496-201ENSMUST00000178287 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm25649-201ENSMUST00000178476 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm25548-201ENSMUST00000178681 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm23147-201ENSMUST00000178841 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm26095-201ENSMUST00000179270 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm22171-201ENSMUST00000179283 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm23936-201ENSMUST00000179354 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm22619-201ENSMUST00000179516 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm25255-201ENSMUST00000179579 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm24755-201ENSMUST00000179691 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm26506-201ENSMUST00000179692 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm25086-201ENSMUST00000179931 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm23243-201ENSMUST00000180047 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm24659-201ENSMUST00000180212 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm24169-201ENSMUST00000180244 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm23689-201ENSMUST00000180354 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.14■□□□□ 0.01
Stx1aO35526 Gm27359-201ENSMUST00000184153 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm27785-201ENSMUST00000184268 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm27466-201ENSMUST00000184396 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm27703-201ENSMUST00000184836 110 ntBASIC15.14■□□□□ 0.01
Stx1aO35526 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Stx1aO35526 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Stx1aO35526 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Stx1aO35526 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Stx1aO35526 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.14■□□□□ 0.01
Stx1aO35526 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stx1aO35526 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stx1aO35526 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.13■□□□□ 0.01
Stx1aO35526 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Stx1aO35526 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Stx1aO35526 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stx1aO35526 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stx1aO35526 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Stx1aO35526 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms