Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.38□□□□□ -0.59
Prrt1O35449 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.38□□□□□ -0.59
Prrt1O35449 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Prrt1O35449 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Mir698-201ENSMUST00000102164 109 ntBASIC11.38□□□□□ -0.59
Prrt1O35449 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.38□□□□□ -0.59
Prrt1O35449 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.38□□□□□ -0.59
Prrt1O35449 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.38□□□□□ -0.59
Prrt1O35449 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Gm18737-201ENSMUST00000173594 937 ntBASIC11.38□□□□□ -0.59
Prrt1O35449 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.38□□□□□ -0.59
Prrt1O35449 Gm34391-201ENSMUST00000203706 907 ntBASIC11.38□□□□□ -0.59
Prrt1O35449 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.38□□□□□ -0.59
Prrt1O35449 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.38□□□□□ -0.59
Prrt1O35449 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Gm15590-201ENSMUST00000078419 552 ntBASIC11.38□□□□□ -0.59
Prrt1O35449 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.38□□□□□ -0.59
Prrt1O35449 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Prrt1O35449 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.38□□□□□ -0.59
Prrt1O35449 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Prrt1O35449 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Prrt1O35449 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Prrt1O35449 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Prrt1O35449 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Prrt1O35449 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Prrt1O35449 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.37□□□□□ -0.59
Prrt1O35449 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Prrt1O35449 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.37□□□□□ -0.59
Prrt1O35449 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Prrt1O35449 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.37□□□□□ -0.59
Prrt1O35449 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Prrt1O35449 Gm27628-201ENSMUST00000184911 107 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm29310-201ENSMUST00000185468 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21825-201ENSMUST00000185728 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm29109-201ENSMUST00000185895 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21896-201ENSMUST00000186520 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21873-201ENSMUST00000186728 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21794-201ENSMUST00000187056 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21880-201ENSMUST00000187275 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21826-201ENSMUST00000187451 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21198-201ENSMUST00000188393 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21749-201ENSMUST00000189343 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21901-201ENSMUST00000189568 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm29424-201ENSMUST00000189716 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm28599-201ENSMUST00000189838 694 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21867-201ENSMUST00000189917 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm29269-201ENSMUST00000190087 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21722-201ENSMUST00000190153 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm28423-201ENSMUST00000190701 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21899-201ENSMUST00000190745 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21910-201ENSMUST00000191163 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21849-201ENSMUST00000191571 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm28678-201ENSMUST00000191593 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm20910-201ENSMUST00000193268 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm21871-201ENSMUST00000194621 696 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Gm37714-201ENSMUST00000194742 342 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Prrt1O35449 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Prrt1O35449 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.37□□□□□ -0.59
Prrt1O35449 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.37□□□□□ -0.59
Prrt1O35449 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Prrt1O35449 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Prrt1O35449 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms