Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ebf3O08791 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ebf3O08791 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.01□□□□□ -0.17
Ebf3O08791 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.01□□□□□ -0.17
Ebf3O08791 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.01□□□□□ -0.17
Ebf3O08791 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.01□□□□□ -0.17
Ebf3O08791 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ebf3O08791 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ebf3O08791 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
Ebf3O08791 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf3O08791 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14□□□□□ -0.17
Ebf3O08791 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ebf3O08791 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Ebf3O08791 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Mir698-201ENSMUST00000102164 109 ntBASIC14□□□□□ -0.17
Ebf3O08791 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Ebf3O08791 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Ebf3O08791 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Ebf3O08791 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Ebf3O08791 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ebf3O08791 Gm24196-201ENSMUST00000179161 110 ntBASIC14□□□□□ -0.17
Ebf3O08791 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ebf3O08791 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Ebf3O08791 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ebf3O08791 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf3O08791 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.99□□□□□ -0.17
Ebf3O08791 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.99□□□□□ -0.17
Ebf3O08791 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Ebf3O08791 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ebf3O08791 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Ebf3O08791 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Ebf3O08791 Gm24644-201ENSMUST00000157114 139 ntBASIC13.99□□□□□ -0.17
Ebf3O08791 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms