Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.19■□□□□ 0.18
NpcdF8VQB8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.19■□□□□ 0.18
NpcdF8VQB8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.18■□□□□ 0.18
NpcdF8VQB8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Gm5523-201ENSMUST00000180415 997 ntBASIC16.18■□□□□ 0.18
NpcdF8VQB8 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NpcdF8VQB8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Gm11439-201ENSMUST00000118598 409 ntBASIC16.17■□□□□ 0.18
NpcdF8VQB8 Gm14726-201ENSMUST00000120623 896 ntBASIC16.17■□□□□ 0.18
NpcdF8VQB8 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Gm29741-201ENSMUST00000192667 421 ntBASIC16.17■□□□□ 0.18
NpcdF8VQB8 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.17■□□□□ 0.18
NpcdF8VQB8 Gm9826-201ENSMUST00000029124 1299 ntBASIC16.17■□□□□ 0.18
NpcdF8VQB8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NpcdF8VQB8 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.17■□□□□ 0.18
NpcdF8VQB8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms