Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Gm8927-201ENSMUST00000181978 981 ntBASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Gm37935-201ENSMUST00000192012 982 ntBASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Gm3222-201ENSMUST00000071282 990 ntBASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh1F7BJK1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Pcdh1F7BJK1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Gm33320-201ENSMUST00000192232 530 ntBASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh1F7BJK1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gm15460-201ENSMUST00000118147 391 ntBASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms