Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm1E9Q9Q2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gm24420-201ENSMUST00000176676 59 ntBASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gm42627-201ENSMUST00000197347 224 ntBASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gm18935-201ENSMUST00000212692 664 ntBASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Mir433-201ENSMUST00000093564 124 ntBASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
R3hdm1E9Q9Q2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Mir7070-201ENSMUST00000183657 86 ntBASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Gm27682-201ENSMUST00000183930 110 ntBASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Gm6334-201ENSMUST00000207083 228 ntBASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
R3hdm1E9Q9Q2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
R3hdm1E9Q9Q2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
R3hdm1E9Q9Q2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
R3hdm1E9Q9Q2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
R3hdm1E9Q9Q2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
R3hdm1E9Q9Q2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms