Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Gm12363-201ENSMUST00000122250 668 ntBASIC16.11■□□□□ 0.17
Ube4aE9Q735 Gm26185-201ENSMUST00000157692 266 ntBASIC16.11■□□□□ 0.17
Ube4aE9Q735 Gm38158-201ENSMUST00000194617 339 ntBASIC16.11■□□□□ 0.17
Ube4aE9Q735 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.11■□□□□ 0.17
Ube4aE9Q735 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.11■□□□□ 0.17
Ube4aE9Q735 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ube4aE9Q735 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Gm13342-201ENSMUST00000121055 207 ntBASIC16.1■□□□□ 0.17
Ube4aE9Q735 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Gm7809-201ENSMUST00000153199 742 ntBASIC16.1■□□□□ 0.17
Ube4aE9Q735 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Gm29396-201ENSMUST00000185659 716 ntBASIC16.1■□□□□ 0.17
Ube4aE9Q735 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.1■□□□□ 0.17
Ube4aE9Q735 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Gm7783-201ENSMUST00000204795 781 ntBASIC16.1■□□□□ 0.17
Ube4aE9Q735 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.1■□□□□ 0.17
Ube4aE9Q735 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Gm9368-201ENSMUST00000219348 831 ntBASIC16.1■□□□□ 0.17
Ube4aE9Q735 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ube4aE9Q735 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ube4aE9Q735 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4aE9Q735 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.09■□□□□ 0.17
Ube4aE9Q735 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.09■□□□□ 0.17
Ube4aE9Q735 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.09■□□□□ 0.17
Ube4aE9Q735 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.09■□□□□ 0.17
Ube4aE9Q735 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4aE9Q735 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Ube4aE9Q735 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4aE9Q735 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Ube4aE9Q735 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4aE9Q735 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4aE9Q735 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Ube4aE9Q735 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.08■□□□□ 0.17
Ube4aE9Q735 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Ube4aE9Q735 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.08■□□□□ 0.16
Ube4aE9Q735 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Gm7584-201ENSMUST00000175829 940 ntBASIC16.08■□□□□ 0.16
Ube4aE9Q735 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.08■□□□□ 0.16
Ube4aE9Q735 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.08■□□□□ 0.16
Ube4aE9Q735 Gm43758-201ENSMUST00000199500 367 ntBASIC16.08■□□□□ 0.16
Ube4aE9Q735 Gm8227-201ENSMUST00000223306 571 ntBASIC16.08■□□□□ 0.16
Ube4aE9Q735 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms