Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.36□□□□□ -0.59
Col6a4A2AX52 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Gm22334-201ENSMUST00000158070 133 ntBASIC11.36□□□□□ -0.59
Col6a4A2AX52 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a4A2AX52 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Gm11618-201ENSMUST00000117946 267 ntBASIC11.35□□□□□ -0.59
Col6a4A2AX52 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.35□□□□□ -0.59
Col6a4A2AX52 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Gm3890-201ENSMUST00000182416 207 ntBASIC11.35□□□□□ -0.59
Col6a4A2AX52 Gm29741-201ENSMUST00000192667 421 ntBASIC11.35□□□□□ -0.59
Col6a4A2AX52 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.35□□□□□ -0.59
Col6a4A2AX52 Gm5687-201ENSMUST00000118252 640 ntBASIC11.35□□□□□ -0.59
Col6a4A2AX52 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.35□□□□□ -0.59
Col6a4A2AX52 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a4A2AX52 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm11222-201ENSMUST00000119005 738 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms