Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Gm15240-201ENSMUST00000118156 720 ntBASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Gm38294-201ENSMUST00000192831 381 ntBASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.43■□□□□ 0.06
Ccdc112A0AUP1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc112A0AUP1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Gm14767-201ENSMUST00000121559 586 ntBASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Gm27702-201ENSMUST00000184512 56 ntBASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.41■□□□□ 0.06
Ccdc112A0AUP1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ccdc112A0AUP1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms