Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm14701-201ENSMUST00000117156 348 ntBASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm27430-201ENSMUST00000184585 107 ntBASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm10253-201ENSMUST00000194270 940 ntBASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm44333-201ENSMUST00000197168 107 ntBASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm18049-201ENSMUST00000208909 581 ntBASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm43474-201ENSMUST00000196415 774 ntBASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.07□□□□□ -0.8
Trav6n-6A0A075B6B2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms