Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Trav8-1A0A075B641 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav8-1A0A075B641 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
Trav8-1A0A075B641 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav8-1A0A075B641 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Trav8-1A0A075B641 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav8-1A0A075B641 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav8-1A0A075B641 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav8-1A0A075B641 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC9.65□□□□□ -0.87
Trav8-1A0A075B641 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Gm18246-201ENSMUST00000221023 728 ntBASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 AC154725.1-201ENSMUST00000224826 1961 ntBASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav8-1A0A075B641 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav8-1A0A075B641 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms