Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 AA543401-201ENSMUST00000164248 1269 ntBASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Gm27300-201ENSMUST00000184085 97 ntBASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Gm27335-201ENSMUST00000184758 97 ntBASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Thap2-203ENSMUST00000218989 527 ntBASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gm15678-201ENSMUST00000117573 960 ntBASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gm13597-201ENSMUST00000121239 375 ntBASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gm18027-201ENSMUST00000218947 619 ntBASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav7n-4A0A075B620 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms