Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Gm43094-201ENSMUST00000196549 921 ntBASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb2S4R1M3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Gm12485-201ENSMUST00000119641 291 ntBASIC13.5□□□□□ -0.25
H2afb2S4R1M3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Gm24447-201ENSMUST00000083977 338 ntBASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
H2afb2S4R1M3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms