Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.18□□□□□ -0.46
H2afb3S4R1G7 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Gm46209-201ENSMUST00000217912 553 ntBASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Gm8927-201ENSMUST00000181978 981 ntBASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Gm27533-201ENSMUST00000183800 152 ntBASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Gm3222-201ENSMUST00000071282 990 ntBASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
H2afb3S4R1G7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Gm12585-201ENSMUST00000117307 290 ntBASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb3S4R1G7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms