Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.5□□□□□ -0.73
CcsQ9WU84 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.5□□□□□ -0.73
CcsQ9WU84 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.5□□□□□ -0.73
CcsQ9WU84 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.5□□□□□ -0.73
CcsQ9WU84 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
CcsQ9WU84 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.49□□□□□ -0.73
CcsQ9WU84 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.49□□□□□ -0.73
CcsQ9WU84 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.49□□□□□ -0.73
CcsQ9WU84 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.49□□□□□ -0.73
CcsQ9WU84 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.49□□□□□ -0.73
CcsQ9WU84 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.49□□□□□ -0.73
CcsQ9WU84 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CcsQ9WU84 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CcsQ9WU84 Gm9385-201ENSMUST00000117563 472 ntBASIC10.48□□□□□ -0.73
CcsQ9WU84 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.48□□□□□ -0.73
CcsQ9WU84 Gm11745-201ENSMUST00000121669 448 ntBASIC10.48□□□□□ -0.73
CcsQ9WU84 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms