Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Syt7-205ENSMUST00000224135 1557 ntBASIC12.74□□□□□ -0.37
Trim3Q9R1R2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Gm21470-201ENSMUST00000187680 696 ntBASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim3Q9R1R2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Gm22189-201ENSMUST00000103822 86 ntBASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Gm21854-201ENSMUST00000179901 471 ntBASIC12.73□□□□□ -0.37
Trim3Q9R1R2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim3Q9R1R2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Gm10766-202ENSMUST00000194123 606 ntBASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms