Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40aQ9R1C7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Prpf40aQ9R1C7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40aQ9R1C7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40aQ9R1C7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40aQ9R1C7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40aQ9R1C7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40aQ9R1C7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40aQ9R1C7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40aQ9R1C7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40aQ9R1C7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Grk6-205ENSMUST00000224653 2976 ntBASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Gm28760-201ENSMUST00000185995 736 ntBASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40aQ9R1C7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms