Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SrfQ9JM73 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.73□□□□□ -0.37
SrfQ9JM73 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SrfQ9JM73 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.73□□□□□ -0.37
SrfQ9JM73 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm24548-201ENSMUST00000158650 108 ntBASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm45071-201ENSMUST00000205353 571 ntBASIC12.73□□□□□ -0.37
SrfQ9JM73 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SrfQ9JM73 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.73□□□□□ -0.37
SrfQ9JM73 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
SrfQ9JM73 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SrfQ9JM73 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SrfQ9JM73 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Gm15074-201ENSMUST00000117603 936 ntBASIC12.72□□□□□ -0.37
SrfQ9JM73 Gm11964-201ENSMUST00000120982 444 ntBASIC12.72□□□□□ -0.37
SrfQ9JM73 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC12.72□□□□□ -0.37
SrfQ9JM73 Gm3890-201ENSMUST00000182416 207 ntBASIC12.72□□□□□ -0.37
SrfQ9JM73 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.72□□□□□ -0.37
SrfQ9JM73 Gm18584-201ENSMUST00000203098 964 ntBASIC12.72□□□□□ -0.37
SrfQ9JM73 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.72□□□□□ -0.37
SrfQ9JM73 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SrfQ9JM73 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SrfQ9JM73 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SrfQ9JM73 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
SrfQ9JM73 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.72□□□□□ -0.37
SrfQ9JM73 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SrfQ9JM73 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
SrfQ9JM73 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
SrfQ9JM73 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SrfQ9JM73 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SrfQ9JM73 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SrfQ9JM73 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SrfQ9JM73 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.71□□□□□ -0.37
SrfQ9JM73 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Gm10434-201ENSMUST00000101158 471 ntBASIC12.71□□□□□ -0.37
SrfQ9JM73 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SrfQ9JM73 Gm13333-201ENSMUST00000119424 781 ntBASIC12.71□□□□□ -0.37
SrfQ9JM73 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.71□□□□□ -0.37
SrfQ9JM73 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.71□□□□□ -0.37
SrfQ9JM73 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SrfQ9JM73 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.71□□□□□ -0.37
SrfQ9JM73 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms