Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl28Q9JIL2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Gm15393-201ENSMUST00000120499 219 ntBASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Gm25925-201ENSMUST00000158314 306 ntBASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl28Q9JIL2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms