Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgn3Q9DCB1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Gm15483-201ENSMUST00000120338 456 ntBASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Gm27920-201ENSMUST00000183953 96 ntBASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Gm6443-201ENSMUST00000203599 874 ntBASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms