Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne8Q9DC53 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne8Q9DC53 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Gm15321-201ENSMUST00000121290 288 ntBASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne8Q9DC53 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Gm14719-201ENSMUST00000121891 340 ntBASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Gm29608-201ENSMUST00000190444 463 ntBASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Gm43094-201ENSMUST00000196549 921 ntBASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.07□□□□□ -0.16
Cpne8Q9DC53 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne8Q9DC53 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Gm20445-201ENSMUST00000061905 565 ntBASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne8Q9DC53 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms