Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Gm8927-201ENSMUST00000181978 981 ntBASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Gm44344-201ENSMUST00000200287 129 ntBASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Gm9229-201ENSMUST00000222777 126 ntBASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Gm3222-201ENSMUST00000071282 990 ntBASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4cQ9D7F7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4cQ9D7F7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Gm27430-201ENSMUST00000184585 107 ntBASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Gm44333-201ENSMUST00000197168 107 ntBASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp4cQ9D7F7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp4cQ9D7F7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms