Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Stag1Q9D3E6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stag1Q9D3E6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Mir1247-201ENSMUST00000116706 82 ntBASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gm19184-201ENSMUST00000196798 928 ntBASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gm45880-201ENSMUST00000213041 853 ntBASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gm19309-201ENSMUST00000218295 205 ntBASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Gm16372-201ENSMUST00000073088 450 ntBASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stag1Q9D3E6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Gm6013-201ENSMUST00000212264 699 ntBASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Gm10268-201ENSMUST00000085340 555 ntBASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Olfr582-201ENSMUST00000098212 960 ntBASIC16.04■□□□□ 0.16
Stag1Q9D3E6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stag1Q9D3E6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Gm14350-201ENSMUST00000116642 640 ntBASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Gm11618-201ENSMUST00000117946 267 ntBASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Gm43179-201ENSMUST00000198797 275 ntBASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Stag1Q9D3E6 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms