Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.74■□□□□ 0.27
Nip7Q9CXK8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Nip7Q9CXK8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nip7Q9CXK8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nip7Q9CXK8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nip7Q9CXK8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Nip7Q9CXK8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Nip7Q9CXK8 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.73■□□□□ 0.27
Nip7Q9CXK8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Gm22323-201ENSMUST00000103832 109 ntBASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Gm13297-201ENSMUST00000120205 934 ntBASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Mir3102-201ENSMUST00000175555 104 ntBASIC16.73■□□□□ 0.27
Nip7Q9CXK8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Gm19163-201ENSMUST00000223313 780 ntBASIC16.73■□□□□ 0.27
Nip7Q9CXK8 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nip7Q9CXK8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Gm11637-201ENSMUST00000120601 592 ntBASIC16.72■□□□□ 0.27
Nip7Q9CXK8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Gm37489-201ENSMUST00000191883 159 ntBASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nip7Q9CXK8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Gm24255-201ENSMUST00000104481 128 ntBASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Gm12363-201ENSMUST00000122250 668 ntBASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Gm3890-201ENSMUST00000182416 207 ntBASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Gm29199-201ENSMUST00000187766 775 ntBASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Gm7046-201ENSMUST00000221351 977 ntBASIC16.71■□□□□ 0.27
Nip7Q9CXK8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nip7Q9CXK8 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.71■□□□□ 0.26
Nip7Q9CXK8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nip7Q9CXK8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nip7Q9CXK8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nip7Q9CXK8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms