Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Gm18737-201ENSMUST00000173594 937 ntBASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Gm2651-201ENSMUST00000203560 838 ntBASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Chd1lQ9CXF7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Matn2-203ENSMUST00000226766 3252 ntBASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd1lQ9CXF7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1lQ9CXF7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1lQ9CXF7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms