Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpusd4Q9CWX4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Mir125a-201ENSMUST00000083545 68 ntBASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpusd4Q9CWX4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Gm15957-201ENSMUST00000118893 974 ntBASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Mir7684-201ENSMUST00000183858 60 ntBASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Gm20949-201ENSMUST00000206478 952 ntBASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Gm7775-201ENSMUST00000218871 853 ntBASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpusd4Q9CWX4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms