Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
Cldnd1Q9CQX5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Gm14028-201ENSMUST00000117434 479 ntBASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Gm13461-201ENSMUST00000120980 662 ntBASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Gm13316-201ENSMUST00000140537 691 ntBASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldnd1Q9CQX5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Gm12566-201ENSMUST00000121479 359 ntBASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Gm44967-201ENSMUST00000207047 631 ntBASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.73□□□□□ -0.21
Cldnd1Q9CQX5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms