Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gm12859-201ENSMUST00000117834 427 ntBASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gm17330-201ENSMUST00000221047 165 ntBASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gm5161-201ENSMUST00000075243 853 ntBASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa3Q9CQ71 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa3Q9CQ71 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Gm26464-201ENSMUST00000157094 305 ntBASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Gm24447-201ENSMUST00000083977 338 ntBASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa3Q9CQ71 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa3Q9CQ71 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms