Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Mir874-201ENSMUST00000104769 76 ntBASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb1Q9CQ70 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Gm9063-201ENSMUST00000223299 582 ntBASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms