Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim33Q99PP7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim33Q99PP7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim33Q99PP7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Trim33Q99PP7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim33Q99PP7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Gm24420-201ENSMUST00000176676 59 ntBASIC13.45□□□□□ -0.26
Trim33Q99PP7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.45□□□□□ -0.26
Trim33Q99PP7 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.45□□□□□ -0.26
Trim33Q99PP7 Gm17795-201ENSMUST00000214505 757 ntBASIC13.45□□□□□ -0.26
Trim33Q99PP7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim33Q99PP7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Gm18905-201ENSMUST00000205454 928 ntBASIC13.44□□□□□ -0.26
Trim33Q99PP7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.44□□□□□ -0.26
Trim33Q99PP7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim33Q99PP7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Trim33Q99PP7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim33Q99PP7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim33Q99PP7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim33Q99PP7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim33Q99PP7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim33Q99PP7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim33Q99PP7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim33Q99PP7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim33Q99PP7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim33Q99PP7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms