Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 Gm11450-201ENSMUST00000121144 333 ntBASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh15Q99PJ1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Pcdh15Q99PJ1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Gm16296-201ENSMUST00000159905 325 ntBASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdh15Q99PJ1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Mir339-201ENSMUST00000083659 96 ntBASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh15Q99PJ1 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms