Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Gm22121-201ENSMUST00000175148 54 ntBASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh23Q99PF4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Gm13611-201ENSMUST00000118269 318 ntBASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Gm17208-201ENSMUST00000168388 535 ntBASIC13.41□□□□□ -0.26
Cdh23Q99PF4 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh23Q99PF4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Gm15547-201ENSMUST00000122152 333 ntBASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Gm10076-201ENSMUST00000073238 384 ntBASIC13.4□□□□□ -0.26
Cdh23Q99PF4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.4□□□□□ -0.26
Cdh23Q99PF4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Gm6447-201ENSMUST00000118905 835 ntBASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Gm17812-201ENSMUST00000204935 318 ntBASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Gm18730-201ENSMUST00000218038 343 ntBASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh23Q99PF4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms