Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Gm15957-201ENSMUST00000118893 974 ntBASIC11.48□□□□□ -0.57
Smim3Q99PE5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.48□□□□□ -0.57
Smim3Q99PE5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim3Q99PE5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.47□□□□□ -0.57
Smim3Q99PE5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.47□□□□□ -0.57
Smim3Q99PE5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Gm7153-201ENSMUST00000117092 455 ntBASIC11.47□□□□□ -0.57
Smim3Q99PE5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.47□□□□□ -0.57
Smim3Q99PE5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Gm27920-201ENSMUST00000183953 96 ntBASIC11.47□□□□□ -0.57
Smim3Q99PE5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Gm29741-201ENSMUST00000192667 421 ntBASIC11.47□□□□□ -0.57
Smim3Q99PE5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.47□□□□□ -0.57
Smim3Q99PE5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.47□□□□□ -0.57
Smim3Q99PE5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.47□□□□□ -0.57
Smim3Q99PE5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Smim3Q99PE5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim3Q99PE5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Smim3Q99PE5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms