Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh4Q99MT2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.17□□□□□ -0.3
Msh4Q99MT2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.17□□□□□ -0.3
Msh4Q99MT2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.17□□□□□ -0.3
Msh4Q99MT2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh4Q99MT2 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.17□□□□□ -0.3
Msh4Q99MT2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.16□□□□□ -0.3
Msh4Q99MT2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.16□□□□□ -0.3
Msh4Q99MT2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.16□□□□□ -0.3
Msh4Q99MT2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.16□□□□□ -0.3
Msh4Q99MT2 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.16□□□□□ -0.3
Msh4Q99MT2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Msh4Q99MT2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh4Q99MT2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh4Q99MT2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh4Q99MT2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh4Q99MT2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh4Q99MT2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.15□□□□□ -0.3
Msh4Q99MT2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms