Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col25a1Q99MQ5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Gm8749-201ENSMUST00000117737 331 ntBASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Gm19459-201ENSMUST00000176240 835 ntBASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col25a1Q99MQ5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col25a1Q99MQ5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Col25a1Q99MQ5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col25a1Q99MQ5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col25a1Q99MQ5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col25a1Q99MQ5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Col25a1Q99MQ5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col25a1Q99MQ5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Gm14726-201ENSMUST00000120623 896 ntBASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col25a1Q99MQ5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms