Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nkd1Q99MH6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nkd1Q99MH6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkd1Q99MH6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkd1Q99MH6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkd1Q99MH6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkd1Q99MH6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkd1Q99MH6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkd1Q99MH6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkd1Q99MH6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Mir449b-201ENSMUST00000104833 80 ntBASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.74□□□□□ -0.37
Nkd1Q99MH6 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd1Q99MH6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Gm28630-201ENSMUST00000187806 498 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Gm2756-201ENSMUST00000195851 400 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Gm5312-201ENSMUST00000203728 547 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Gm46209-201ENSMUST00000217912 553 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Gm9229-201ENSMUST00000222777 126 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Shd-206ENSMUST00000225145 998 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd1Q99MH6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd1Q99MH6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms