Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm2445-201ENSMUST00000182798 989 ntBASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Rubie-203ENSMUST00000227803 2430 ntBASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp1b1Q99LU0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Gm12585-201ENSMUST00000117307 290 ntBASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp1b1Q99LU0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms