Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Gm15370-201ENSMUST00000117158 253 ntBASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Gm12997-201ENSMUST00000120207 640 ntBASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Gm5363-201ENSMUST00000211927 938 ntBASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Gm6082-201ENSMUST00000215204 454 ntBASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cstf1Q99LC2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Gm17376-201ENSMUST00000166016 84 ntBASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Gm26927-201ENSMUST00000182385 965 ntBASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Gm43138-201ENSMUST00000199123 708 ntBASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cstf1Q99LC2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms