Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TrabdQ99JY4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TrabdQ99JY4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TrabdQ99JY4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TrabdQ99JY4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TrabdQ99JY4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TrabdQ99JY4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TrabdQ99JY4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TrabdQ99JY4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TrabdQ99JY4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.02□□□□□ -0.17
TrabdQ99JY4 Gm10156-201ENSMUST00000122364 462 ntBASIC14.02□□□□□ -0.17
TrabdQ99JY4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.02□□□□□ -0.17
TrabdQ99JY4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.02□□□□□ -0.17
TrabdQ99JY4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TrabdQ99JY4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.01□□□□□ -0.17
TrabdQ99JY4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.01□□□□□ -0.17
TrabdQ99JY4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Gm13226-201ENSMUST00000117838 404 ntBASIC14.01□□□□□ -0.17
TrabdQ99JY4 Gm11803-201ENSMUST00000119966 444 ntBASIC14.01□□□□□ -0.17
TrabdQ99JY4 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.01□□□□□ -0.17
TrabdQ99JY4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Gm22331-201ENSMUST00000158066 136 ntBASIC14.01□□□□□ -0.17
TrabdQ99JY4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.01□□□□□ -0.17
TrabdQ99JY4 Gm29127-201ENSMUST00000188304 517 ntBASIC14.01□□□□□ -0.17
TrabdQ99JY4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.01□□□□□ -0.17
TrabdQ99JY4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.01□□□□□ -0.17
TrabdQ99JY4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TrabdQ99JY4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14□□□□□ -0.17
TrabdQ99JY4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14□□□□□ -0.17
TrabdQ99JY4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14□□□□□ -0.17
TrabdQ99JY4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TrabdQ99JY4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TrabdQ99JY4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14□□□□□ -0.17
TrabdQ99JY4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TrabdQ99JY4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms