Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.52■□□□□ 0.08
Rfc4Q99J62 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.52■□□□□ 0.08
Rfc4Q99J62 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Mir877-201ENSMUST00000104738 85 ntBASIC15.52■□□□□ 0.08
Rfc4Q99J62 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Gm15808-201ENSMUST00000119046 604 ntBASIC15.52■□□□□ 0.08
Rfc4Q99J62 Gm2445-201ENSMUST00000182798 989 ntBASIC15.52■□□□□ 0.08
Rfc4Q99J62 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Gm37466-201ENSMUST00000195692 652 ntBASIC15.52■□□□□ 0.08
Rfc4Q99J62 Gm6334-201ENSMUST00000207083 228 ntBASIC15.52■□□□□ 0.08
Rfc4Q99J62 Gm10608-202ENSMUST00000213924 676 ntBASIC15.52■□□□□ 0.08
Rfc4Q99J62 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.52■□□□□ 0.08
Rfc4Q99J62 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.52■□□□□ 0.08
Rfc4Q99J62 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc4Q99J62 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc4Q99J62 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc4Q99J62 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rfc4Q99J62 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc4Q99J62 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc4Q99J62 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc4Q99J62 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc4Q99J62 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.52■□□□□ 0.07
Rfc4Q99J62 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.52■□□□□ 0.07
Rfc4Q99J62 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfc4Q99J62 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Gm29199-201ENSMUST00000187766 775 ntBASIC15.51■□□□□ 0.07
Rfc4Q99J62 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc4Q99J62 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.5■□□□□ 0.07
Rfc4Q99J62 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc4Q99J62 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.49■□□□□ 0.07
Rfc4Q99J62 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms