Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Gm44344-201ENSMUST00000200287 129 ntBASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhac1Q91Y10 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhac1Q91Y10 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhac1Q91Y10 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Gm13223-201ENSMUST00000118609 747 ntBASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhac1Q91Y10 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 390.1 ms