Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm15678-201ENSMUST00000117573 960 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm12403-201ENSMUST00000121384 959 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm16215-201ENSMUST00000161990 637 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm42612-201ENSMUST00000197986 623 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm43170-201ENSMUST00000199827 612 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Gm15376-201ENSMUST00000122258 783 ntBASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Gm5354-201ENSMUST00000182417 973 ntBASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.04□□□□□ -0.16
Pcdhb1Q91Y08 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb1Q91Y08 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms