Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb4Q91XZ6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb4Q91XZ6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb4Q91XZ6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb4Q91XZ6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.46□□□□□ -0.26
Pcdhb4Q91XZ6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Pcdhb4Q91XZ6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdhb4Q91XZ6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Gm15393-201ENSMUST00000120499 219 ntBASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Gm44344-201ENSMUST00000200287 129 ntBASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Gm44719-201ENSMUST00000206404 149 ntBASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Gm6888-201ENSMUST00000221983 706 ntBASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb4Q91XZ6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms