Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb8Q91XZ2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb8Q91XZ2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb8Q91XZ2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb8Q91XZ2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb8Q91XZ2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb8Q91XZ2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Gm27989-201ENSMUST00000184721 107 ntBASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb8Q91XZ2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb8Q91XZ2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Gm15770-201ENSMUST00000117498 584 ntBASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Gm9522-201ENSMUST00000182394 926 ntBASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb8Q91XZ2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb8Q91XZ2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Pcdhb8Q91XZ2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb8Q91XZ2 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.21□□□□□ -0.3
Pcdhb8Q91XZ2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb8Q91XZ2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb8Q91XZ2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb8Q91XZ2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb8Q91XZ2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Pcdhb8Q91XZ2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Pcdhb8Q91XZ2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms