Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
H1fooQ8VIK3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H1fooQ8VIK3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Gm15770-201ENSMUST00000117498 584 ntBASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.32□□□□□ -0.6
H1fooQ8VIK3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H1fooQ8VIK3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.31□□□□□ -0.6
H1fooQ8VIK3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms